Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000005087GBD/FH3 domain-containing protein. (240 aa)    
Predicted Functional Partners:
ENSACIP00000005116
Uncharacterized protein.
 
 
  0.841
ENSACIP00000009786
Speckle type BTB/POZ protein.
    
 
 0.794
SPOP
Speckle type BTB/POZ protein.
    
 
 0.794
ENSACIP00000019293
Speckle type BTB/POZ protein like b.
    
 
 0.794
FMN1
Formin 1.
    
 0.740
ENSACIP00000012794
Uncharacterized protein.
    
 0.740
DIAPH1
Diaphanous related formin 1.
     
 0.720
ENSACIP00000017785
Diaphanous-related formin 2.
     
 0.720
ENSACIP00000030948
Diaphanous-related formin 3.
     
 0.720
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.719
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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