Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
ENSACIP00000005146Vacuolar protein sorting 13 homolog A. (3167 aa)    
Predicted Functional Partners:
ENSACIP00000030872
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 
 0.827
ENSACIP00000019583
CTF18, chromosome transmission fidelity factor 18 homolog (S. cerevisiae).
    
   0.772
ENSACIP00000011662
Synaptojanin 1.
    
 
 0.761
ENSACIP00000025634
NudC domain containing 1.
    
   0.709
ENSACIP00000024899
SPG11 vesicle trafficking associated, spatacsin.
   
  
 0.636
ENSACIP00000018624
Cation-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type V subfamily.
   
 
 0.618
ENSACIP00000010469
Centrin 3.
    
 
 0.606
ENSACIP00000004950
Phospholipase A2, group VI (cytosolic, calcium-independent).
   
  
 0.599
DNAJC13
DnaJ heat shock protein family (Hsp40) member C13.
   
  
 0.597
ENSACIP00000031412
Baculoviral IAP repeat containing 6.
   
 
 0.597
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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