Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000005154Tripartite motif containing 54. (303 aa)    
Predicted Functional Partners:
ENSACIP00000011871
Tripartite motif containing 101.
     
  0.865
TRIM55
Tripartite motif containing 55.
     
  0.865
ENSACIP00000028887
Tripartite motif containing 55b.
     
  0.865
ENSACIP00000010354
Tripartite motif containing 63b.
     
  0.861
ENSACIP00000007939
Tripartite motif containing 23.
    
 0.664
ENSACIP00000012626
Sequestosome 1.
    
 0.660
ENSACIP00000028794
Basic helix-loop-helix family, member e22.
      
 0.636
ENSACIP00000014465
Zgc:100920.
      
 0.581
ENSACIP00000025887
Sodium/potassium transporting ATPase interacting 4.
      
 0.581
ENSACIP00000008846
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
    
   0.545
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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