Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000005202Uncharacterized protein. (1785 aa)    
Predicted Functional Partners:
ENSACIP00000015810
LisH domain-containing protein.
   
 
 0.776
ENSACIP00000014296
DNA replication and sister chromatid cohesion 1.
      
 0.722
ENSACIP00000020513
LSM11, U7 small nuclear RNA associated.
      
 0.713
ENSACIP00000027478
WD repeat-containing protein 76; Specifically binds 5-hydroxymethylcytosine (5hmC), suggesting that it acts as a specific reader of 5hmC. Belongs to the WD repeat DDB2/WDR76 family.
      
 0.703
ENSACIP00000020907
Small ubiquitin-related modifier.
    
  0.673
ENSACIP00000002494
DNA polymerase.
   
  
 0.664
ENSACIP00000022929
Replication timing regulatory factor 1.
   
    0.663
ENSACIP00000000022
DNA primase; Belongs to the eukaryotic-type primase small subunit family.
   
  
 0.657
ENSACIP00000006545
DNA replication complex GINS protein PSF2; Belongs to the GINS2/PSF2 family.
      
 0.641
ENSACIP00000019032
Protein inhibitor of activated STAT, 4a.
    
 0.640
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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