Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000005231Parvalbumin 7; Belongs to the parvalbumin family. (108 aa)    
Predicted Functional Partners:
ENSACIP00000001966
Myosin IIIB; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.731
ENSACIP00000003035
Myosin IIIA; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.731
ENSACIP00000025740
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
    
 0.730
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
    
 0.730
ENSACIP00000025650
Leucine-rich repeats and guanylate kinase domain containing.
    
 0.693
ENSACIP00000002928
Glutamate decarboxylase 2.
   
 
 0.684
ENSACIP00000000202
Neurofilament, light polypeptide b; Belongs to the intermediate filament family.
    
 
 0.683
NEFL
Neurofilament light; Belongs to the intermediate filament family.
    
 
 0.643
SST
Somatostatin.
      
 0.637
ENSACIP00000010631
Uncharacterized protein; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.
      
 0.636
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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