Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000005280Vimentin like; Belongs to the intermediate filament family. (455 aa)    
Predicted Functional Partners:
ENSACIP00000012902
Desmin b; Belongs to the intermediate filament family.
     
  0.853
ENSACIP00000016151
Desmin a; Belongs to the intermediate filament family.
     
  0.853
ENSACIP00000021044
IF rod domain-containing protein; Belongs to the intermediate filament family.
     
  0.853
ENSACIP00000023719
Vimentin-related 1; Belongs to the intermediate filament family.
     
  0.853
ENSACIP00000008319
IF rod domain-containing protein.
    
 
 0.829
ENSACIP00000020284
GLIS family zinc finger 2b.
    
 
 0.721
ENSACIP00000029902
Sad1 and UNC84 domain containing 1.
    
 0.661
ENSACIP00000003366
Zgc:172323; Belongs to the intermediate filament family.
    
  0.637
CASP6
Caspase 6, apoptosis-related cysteine peptidase a; Belongs to the peptidase C14A family.
    
 0.637
ENSACIP00000008770
Occludin b.
    
 
 0.627
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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