Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000005296Heart and neural crest derivatives expressed 2. (190 aa)    
Predicted Functional Partners:
ENSACIP00000006104
GATA binding protein 4.
   
 0.907
ENSACIP00000024632
T-box transcription factor 5a.
    
 0.888
ENSACIP00000021621
NK2 homeobox 5.
   
 0.844
ENSACIP00000005597
SET and MYND domain containing 1b.
    
 0.841
ENSACIP00000016775
Uncharacterized protein.
   
   0.803
ENSACIP00000002913
Transcription factor 12.
    
 0.795
ENSACIP00000019127
Transcription factor 3b.
    
 0.795
ENSACIP00000023074
Transcription factor 3a.
    
 0.795
TCF4
Transcription factor 4.
    
 0.795
ENSACIP00000030408
T-box transcription factor 20.
   
 
 0.792
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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