STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000005337Ferredoxin-fold anticodon binding domain containing 1. (591 aa)    
Predicted Functional Partners:
ENSACIP00000020212
Leucine rich repeat containing 47.
  
 0.994
ENSACIP00000027930
Phenylalanyl-tRNA synthetase subunit beta.
  
 0.994
ENSACIP00000022512
Tyrosine--tRNA ligase.
  
 
 0.925
ENSACIP00000004517
Adipocyte plasma membrane associated protein.
  
  
 0.924
ENSACIP00000004884
Zgc:194209.
  
  
 0.924
PNPT1
Polyribonucleotide nucleotidyltransferase 1.
  
  
 0.924
ENSACIP00000010152
Glutamyl-prolyl-tRNA synthetase.
  
  
 0.897
ENSACIP00000026474
Phenylalanyl-tRNA synthetase subunit alpha.
   
 
 0.895
ENSACIP00000025679
Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family.
   
  
 0.885
ENSACIP00000015374
Alpha-1,3-glucosyltransferase; Belongs to the ALG6/ALG8 glucosyltransferase family.
   
 
  0.883
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.