Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ENSACIP00000005348Target of EGR1, exonuclease. (521 aa)    
Predicted Functional Partners:
ENSACIP00000015987
Snurportin 1.
    
 
 0.976
ENSACIP00000027512
Small nuclear ribonucleoprotein polypeptide A.
    
   0.937
ENSACIP00000003241
Proline rich mitotic checkpoint control factor.
   
   0.887
ENSACIP00000021296
Splicing factor 3b, subunit 3.
    
   0.863
ENSACIP00000008617
Gem (nuclear organelle) associated protein 8.
      
 0.853
LSM4
U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.
    
 
 0.842
ENSACIP00000021859
Angiogenic factor with G patch and FHA domains 1.
    
 
 0.835
ENSACIP00000022712
RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.
    
   0.834
WDR77
WD repeat domain 77.
    
 
 0.783
ENSACIP00000000827
Splicing factor 3b, subunit 2.
    
   0.777
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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