STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000005366Integrase catalytic domain-containing protein. (329 aa)    
Predicted Functional Partners:
ENSACIP00000006898
ERCC4 domain-containing protein.
    
 0.820
ENSACIP00000006969
Uncharacterized protein.
    
 0.820
ENSACIP00000011375
Lin-52 DREAM MuvB core complex component.
    
 0.729
ENSACIP00000011559
Hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase).
   
 
 0.729
ENSACIP00000007680
Lin-54 DREAM MuvB core complex component.
    
 0.724
ENSACIP00000019945
Uncharacterized protein.
     
  0.694
ENSACIP00000029673
Interleukin 19 like.
     
  0.694
ENSACIP00000018666
Uncharacterized protein.
     
  0.681
ENSACIP00000007311
Lin-9 DREAM MuvB core complex component.
    
 0.668
ENSACIP00000020299
Retinoblastoma binding protein 4.
    
 0.606
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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