Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene co-occurrence
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[Homology]
Score
ENSACIP00000005752DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at the specific target site 5'-[CT]CCTTp site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 5'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand thus r [...] (561 aa)    
Predicted Functional Partners:
ENSACIP00000010043
Tyrosyl-DNA phosphodiesterase 1.
    
 
 0.923
ENSACIP00000007255
Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair.
   
 
 0.915
ENSACIP00000003342
Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.
   
 
 0.884
ENSACIP00000030785
BLM RecQ like helicase.
   
 
 0.881
ENSACIP00000012372
SPT16 homolog, facilitates chromatin remodeling subunit.
   
 
 0.874
ENSACIP00000000966
MUS81 structure-specific endonuclease subunit.
    
 
 0.873
ENSACIP00000002259
X-ray repair complementing defective repair in Chinese hamster cells 5.
   
 
 0.864
ENSACIP00000002841
Timeless circadian clock.
   
 
 0.863
ENSACIP00000005836
RAD52 homolog, DNA repair protein.
    
 
 0.855
ENSACIP00000003287
Uncharacterized protein.
   
 
 0.854
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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