Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000005829MIF4G domain containing a. (221 aa)    
Predicted Functional Partners:
ENSACIP00000028825
Stem-loop binding protein.
    
 
 0.916
ENSACIP00000019487
DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 19 (DBP5 homolog, yeast).
    
   0.885
ENSACIP00000010073
Stem-loop binding protein 2.
    
 
 0.797
ENSACIP00000027050
Zinc finger, CCHC domain containing 17.
    
 
 0.669
ENSACIP00000007153
Farnesyltransferase, CAAX box, alpha.
      
 0.629
ENSACIP00000026192
Poly(A) binding protein interacting protein 1.
      
 0.598
ENSACIP00000000598
Signal recognition particle subunit SRP72; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP72 family.
      
 0.589
ENSACIP00000009244
mRNA cap 0 methyltransferase domain-containing protein.
      
 0.548
ENSACIP00000017346
Eukaryotic translation initiation factor 2B, subunit 3 gamma.
      
 0.543
ENSACIP00000016154
Ubiquitin-conjugating enzyme E2 variant 1.
      
 0.535
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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