Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000005869Cadherin 13, H-cadherin (heart). (713 aa)    
Predicted Functional Partners:
ENSACIP00000025985
Catenin (cadherin-associated protein), beta 1.
    
 0.865
ENSACIP00000001865
Catenin (cadherin-associated protein), alpha 2.
    
 0.848
ENSACIP00000012214
Catenin (cadherin-associated protein), alpha 1.
    
 0.846
ENSACIP00000028173
Uncharacterized protein.
    
 0.844
CDH18
Cadherin 18; Cadherins are calcium-dependent cell adhesion proteins.
     
0.804
ENSACIP00000006951
Uncharacterized protein.
    
 0.799
ENSACIP00000010356
Junction plakoglobin a.
    
 0.799
ENSACIP00000016874
Cadherin 17, LI cadherin (liver-intestine).
     
0.780
ENSACIP00000028059
Cadherin 16, KSP-cadherin.
     
0.780
ENSACIP00000005865
Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.
     
0.776
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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