Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000006090Nipped-B protein. (2338 aa)    
Predicted Functional Partners:
ENSACIP00000021046
Structural maintenance of chromosomes protein.
   
 0.983
ENSACIP00000020922
MAU2 sister chromatid cohesion factor.
    
 0.960
MAU2
MAU2 sister chromatid cohesion factor.
    
 0.960
ENSACIP00000014309
PDS5 cohesin associated factor A.
   
 0.959
ENSACIP00000030532
PDS5 cohesin associated factor B.
   
 0.959
ENSACIP00000024328
Nipped-B protein.
  
  
 
0.936
ENSACIP00000024250
Uncharacterized protein.
     
 
0.935
ENSACIP00000029854
Structural maintenance of chromosomes protein.
   
 0.920
ENSACIP00000010489
SMC_N domain-containing protein.
   
 0.913
ENSACIP00000021154
Structural maintenance of chromosomes 1B.
   
 0.913
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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