Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ENSACIP00000006261Lysyl oxidase-like 3b. (812 aa)    
Predicted Functional Partners:
DHX15
DEAH-box helicase 15.
    
   0.740
ENSACIP00000012447
DEAH (Asp-Glu-Ala-His) box helicase 15.
    
   0.740
ENSACIP00000028119
Helicase ATP-binding domain-containing protein.
    
   0.740
ENSACIP00000007255
Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair.
    
   0.596
ENSACIP00000006665
Fras1 related extracellular matrix 1b.
    
 0.555
ENSACIP00000018345
Fras1 related extracellular matrix 1a.
    
 0.555
ENSACIP00000003106
Fraser extracellular matrix complex subunit 1.
   
 0.554
ENSACIP00000010695
Sema domain-containing protein.
    
  0.552
ENSACIP00000010723
Protein kinase domain-containing protein.
    
  0.552
ENSACIP00000012782
Macrophage stimulating 1 receptor b.
    
  0.552
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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