Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ENSACIP00000006282SEH1-like (S. cerevisiae); Belongs to the WD repeat SEC13 family. (368 aa)    
Predicted Functional Partners:
ENSACIP00000001818
WD repeat domain 59.
    
 0.999
ENSACIP00000005740
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
   
 0.999
ENSACIP00000012131
Missing oocyte, meiosis regulator, homolog (Drosophila).
    
 0.999
ENSACIP00000015811
Nucleoporin 133.
   
 0.999
ENSACIP00000017430
Nucleoporin 98.
    
 0.999
ENSACIP00000017533
Nucleoporin 37.
   
 0.999
ENSACIP00000029058
SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family.
   
0.999
ENSACIP00000029414
WD repeat domain 24.
    
 0.999
ENSACIP00000030743
Nucleoporin 43.
   
 0.999
ENSACIP00000031116
Nucleoporin 88.
   
 0.999
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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