Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000006489Zona pellucida glycoprotein d. (360 aa)    
Predicted Functional Partners:
ENSACIP00000023853
U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.
   
 0.995
ENSACIP00000010095
WD repeat domain 46.
   
 0.994
ENSACIP00000022765
NOP14 nucleolar protein homolog (yeast).
   
 0.994
ENSACIP00000003603
DEAD (Asp-Glu-Ala-Asp) box polypeptide 52.
   
 0.993
ENSACIP00000025910
WD_REPEATS_REGION domain-containing protein.
   
 0.993
ENSACIP00000008255
Uncharacterized protein.
   
 0.992
ENSACIP00000014106
UTP3 small subunit processome component.
   
 0.992
UTP14C
UTP14C small subunit processome component.
   
 0.991
ENSACIP00000029836
Ribosomal RNA processing 7 homolog A.
   
 0.991
ENSACIP00000003396
BMS1 ribosome biogenesis factor.
   
 0.989
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.