Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ENSACIP00000006540Mitochondrial E3 ubiquitin protein ligase 1a. (352 aa)    
Predicted Functional Partners:
ENSACIP00000017739
Mitofusin 2; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
    
 0.925
ENSACIP00000000367
Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
    
 0.923
ENSACIP00000000406
Fzo_mitofusin domain-containing protein.
    
 0.923
ENSACIP00000016481
Mitofusin 1b; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
    
 0.923
ENSACIP00000004126
Ribosomal protein S27a.
    
  0.891
ENSACIP00000018853
GABA(A) receptor-associated protein b.
    
 0.888
GABARAPL2
GABA type A receptor associated protein like 2.
    
 0.888
ENSACIP00000001749
Translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae).
     
 0.887
ENSACIP00000026561
Uncharacterized protein.
     
 0.887
MAP1LC3A
Microtubule associated protein 1 light chain 3 alpha.
    
 0.879
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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