Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ENSACIP00000006547Zgc:110843. (123 aa)    
Predicted Functional Partners:
ENSACIP00000031233
Uncharacterized protein.
   
  
 0.897
ENSACIP00000002461
RBR-type E3 ubiquitin transferase.
    
 
 0.789
ENSACIP00000011300
Parkin RBR E3 ubiquitin protein ligase.
    
 
 0.789
ENSACIP00000026665
Damage-specific DNA binding protein 1.
    
 
 0.786
ENSACIP00000003237
Cysteinyl-tRNA synthetase 2, mitochondrial.
      
 0.734
ENSACIP00000021878
Translocator protein.
    
   0.725
ENSACIP00000009900
Selenoprotein W, 2b.
   
  
 0.681
ENSACIP00000031231
Uncharacterized protein.
   
  
 0.681
ENSACIP00000005715
Heat shock factor binding protein 1a.
      
 0.639
ENSACIP00000003259
Uncharacterized protein.
      
 0.637
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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