Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000006557CXXC finger protein 5b. (265 aa)    
Predicted Functional Partners:
ENSACIP00000012770
Tet methylcytosine dioxygenase 3.
    
 0.677
ENSACIP00000026383
Tet methylcytosine dioxygenase 2.
    
 0.677
ENSACIP00000027480
Tet methylcytosine dioxygenase 1.
    
 0.677
ENSACIP00000005766
DIX domain-containing protein.
    
 0.570
ENSACIP00000012587
Dishevelled segment polarity protein 1a.
    
 0.570
ENSACIP00000021823
Dishevelled segment polarity protein 2.
    
 0.570
ENSACIP00000024981
Dishevelled segment polarity protein 3a.
    
 0.570
ENSACIP00000031180
Uncharacterized protein.
    
 0.570
ENSACIP00000028052
BZIP domain-containing protein.
  
     0.443
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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