Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ENSACIP00000006563SAM domain-containing protein. (1439 aa)    
Predicted Functional Partners:
ENSACIP00000022112
WD repeat domain 6.
    
 
 0.809
ENSACIP00000023218
Zgc:153654.
   
 0.744
ENSACIP00000027361
Interferon induced with helicase C domain 1.
   
 
 0.741
ENSACIP00000021220
DEAH (Asp-Glu-Ala-His) box helicase 9.
    
 0.726
ENSACIP00000026737
HEPACAM family member 2.
      
 0.725
ENSACIP00000017602
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
    
 0.709
ENSACIP00000003379
Cullin 1b; Belongs to the cullin family.
    
 0.700
ENSACIP00000014116
Interferon-induced protein 35.
   
 
 0.700
ENSACIP00000009171
V-set domain containing T cell activation inhibitor 1.
    
 
 0.668
ENSACIP00000030511
Cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial.
  
 
 0.656
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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