Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ENSACIP00000006599Serine palmitoyltransferase, small subunit A. (68 aa)    
Predicted Functional Partners:
ENSACIP00000013341
Serine palmitoyltransferase, long chain base subunit 1.
    
 0.998
ENSACIP00000008628
Serine palmitoyltransferase, long chain base subunit 2b.
    
 0.980
ENSACIP00000009742
Serine palmitoyltransferase, long chain base subunit 3.
    
 0.980
ENSACIP00000017936
Aminotran_1_2 domain-containing protein.
    
 0.980
ENSACIP00000019490
Serine palmitoyltransferase, small subunit B.
  
  
0.975
ENSACIP00000009768
Isthmin 1.
    
 0.959
ENSACIP00000006254
ORM1-like protein; Negative regulator of sphingolipid synthesis.
    
 
 0.948
ENSACIP00000008586
Isthmin 2b.
    
 0.914
ENSACIP00000016862
ORM1-like protein; Negative regulator of sphingolipid synthesis.
    
 
 0.872
ENSACIP00000016865
ORM1-like protein; Negative regulator of sphingolipid synthesis.
    
 
 0.872
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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