STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000006697RAB GTPase activating protein 1. (1063 aa)    
Predicted Functional Partners:
ENSACIP00000009136
RAB6B, member RAS oncogene family a.
    
 0.692
RAB41
RAB41, member RAS oncogene family.
    
 0.692
RAB6B
RAB6B, member RAS oncogene family.
    
 0.692
ENSACIP00000018752
RAB6A, member RAS oncogene family.
    
 0.692
ENSACIP00000003133
Uncharacterized protein.
   
  0.680
ENSACIP00000019456
RAB guanine nucleotide exchange factor (GEF) 1, like.
   
  0.680
ENSACIP00000020986
RAB guanine nucleotide exchange factor (GEF) 1.
   
  0.680
ENSACIP00000001192
Uncharacterized protein.
    
  0.549
GGA1
Golgi associated, gamma adaptin ear containing, ARF binding protein 1.
    
  0.549
ENSACIP00000000852
RAB36, member RAS oncogene family.
    
 0.529
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.