STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000006749IST1 factor associated with ESCRT-III. (349 aa)    
Predicted Functional Partners:
ENSACIP00000001549
Vesicle (multivesicular body) trafficking 1.
   
 
 0.984
ENSACIP00000015268
Vacuolar protein sorting 4 homolog A; Belongs to the AAA ATPase family.
   
 0.968
ENSACIP00000016934
Uncharacterized protein; Belongs to the AAA ATPase family.
   
 0.968
VPS4B
Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family.
   
 0.968
ENSACIP00000015766
Uncharacterized protein.
    
 0.966
ENSACIP00000030582
Charged multivesicular body protein 4Bb.
    
 0.964
ENSACIP00000031414
Uncharacterized protein.
    
 0.964
ENSACIP00000031472
Charged multivesicular body protein 3.
    
 0.950
ENSACIP00000005423
Charged multivesicular body protein 5a.
    
 
 0.933
ENSACIP00000022547
Charged multivesicular body protein 5b.
    
 
 0.933
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.