Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000006779Uncharacterized protein. (602 aa)    
Predicted Functional Partners:
ENSACIP00000008092
Translocase of outer mitochondrial membrane 20.
    
 0.860
ENSACIP00000028410
ARID domain-containing protein.
    
 0.860
ENSACIP00000031627
SAGA complex associated factor 29.
   
 0.851
ENSACIP00000016256
Transcriptional adaptor 3 (NGG1 homolog, yeast)-like.
    
 0.848
ENSACIP00000015450
DNA methyltransferase 1 associated protein 1.
    
 0.817
ENSACIP00000019562
MYST/Esa1-associated factor 6.
   
 0.783
ENSACIP00000020363
Down-regulator of transcription 1.
    
 0.779
ENSACIP00000015644
Polymerase (RNA) II (DNA directed) polypeptide C.
   
 0.776
ENSACIP00000000160
General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity.
   
 0.775
ENSACIP00000001812
General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity.
   
 0.775
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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