Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000006874Troponin T type 1 (skeletal, slow). (271 aa)    
Predicted Functional Partners:
ENSACIP00000013112
Troponin I type 1b (skeletal, slow).
  
 0.971
ENSACIP00000019433
Troponin I type 1a (skeletal, slow).
  
 0.971
TNNC1
Troponin C type 1a (slow).
   
 0.955
ENSACIP00000009634
Troponin C type 1b (slow).
   
 0.955
ENSACIP00000003649
Troponin I4b, tandem duplicate 2.
  
 0.951
ENSACIP00000019025
Uncharacterized protein.
  
 0.935
ENSACIP00000029380
Troponin I, skeletal, slow c.
  
 0.931
ENSACIP00000027540
Uncharacterized protein.
  
 0.930
ENSACIP00000005628
Uncharacterized protein.
  
 0.928
ENSACIP00000019005
Troponin I2, fast skeletal type.
   
 0.915
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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