Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000006992Uncharacterized protein. (245 aa)    
Predicted Functional Partners:
ENSACIP00000003527
CCR4-NOT transcription complex, subunit 11.
   
 0.997
ENSACIP00000004675
CCR4-NOT transcription complex, subunit 3b.
    
 0.987
ENSACIP00000008605
CCR4-NOT transcription complex, subunit 3a.
    
 0.987
ENSACIP00000020713
CCR4-NOT transcription complex, subunit 1.
    
 0.987
ENSACIP00000020727
Uncharacterized protein.
    
 0.987
ENSACIP00000012767
CCR4-NOT transcription complex, subunit 10.
    
 0.986
CNOT2
CCR4-NOT transcription complex subunit 2.
   
 0.985
ENSACIP00000026807
CCR4-NOT transcription complex, subunit 2.
   
 0.985
ENSACIP00000017034
CCR4-NOT transcription complex, subunit 8.
   
 0.982
ENSACIP00000027884
CCR4-NOT transcription complex, subunit 7.
   
 0.982
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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