Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000007045Gem (nuclear organelle) associated protein 7. (128 aa)    
Predicted Functional Partners:
ENSACIP00000008617
Gem (nuclear organelle) associated protein 8.
   
 0.999
ENSACIP00000016834
DEAD (Asp-Glu-Ala-Asp) box polypeptide 20; Belongs to the DEAD box helicase family.
    
 0.999
ENSACIP00000017114
Gem (nuclear organelle) associated protein 5.
    
 0.999
ENSACIP00000030385
Gem (nuclear organelle) associated protein 4.
    
 0.999
ENSACIP00000012655
Gem (nuclear organelle) associated protein 6.
   
 0.998
ENSACIP00000027097
Serine/threonine kinase receptor associated protein.
    
 0.995
ENSACIP00000025263
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
 0.977
ENSACIP00000009691
Survival of motor neuron 1, telomeric.
    
 0.968
ENSACIP00000025521
Tudor domain-containing protein.
    
 0.968
ENSACIP00000018501
Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family.
    
 0.966
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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