STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000007535Cholinergic receptor, nicotinic, beta 5a. (498 aa)    
Predicted Functional Partners:
ENSACIP00000020500
Cholinergic receptor, nicotinic, alpha 4b.
  
 
0.783
ENSACIP00000017890
Cholinergic receptor, nicotinic, alpha 1 (muscle).
  
0.753
CHRNA1
Cholinergic receptor nicotinic alpha 1 subunit.
  
0.752
ENSACIP00000004115
Cholinergic receptor, nicotinic, alpha 5.
  
0.734
ENSACIP00000001082
Uncharacterized protein.
  
 
0.701
ENSACIP00000004611
Cholinergic receptor, nicotinic, alpha 2b (neuronal).
  
 
0.687
ENSACIP00000009214
Uncharacterized protein.
  
0.680
ENSACIP00000012983
Uncharacterized protein.
  
0.680
ENSACIP00000007443
Uncharacterized protein.
  
0.679
ENSACIP00000014507
Si:ch211-39a7.1.
  
0.678
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.