STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000009936RAD50 interactor 1. (641 aa)    
Predicted Functional Partners:
ENSACIP00000020141
Zw10 kinetochore protein.
   
 0.999
ENSACIP00000022380
Neuroblastoma amplified sequence.
    
 0.997
ENSACIP00000006707
Ribosomal protein S6 kinase polypeptide 1.
   
 0.996
ENSACIP00000031053
Sorting nexin 15.
   
 0.996
ENSACIP00000021686
Syntaxin 18.
    
 0.991
ENSACIP00000008690
Unconventional SNARE in the ER 1 homolog (S. cerevisiae).
    
 0.988
ENSACIP00000021606
BCL2 interacting protein 1a.
    
 0.977
ENSACIP00000026313
BCL2 interacting protein 1b.
    
 0.977
ENSACIP00000000195
SEC22 homolog B, vesicle trafficking protein a; Belongs to the synaptobrevin family.
    
 0.916
SEC22B
SEC22 homolog B, vesicle trafficking protein (gene/pseudogene); Belongs to the synaptobrevin family.
    
 0.916
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.