STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000010455C1q domain-containing protein. (237 aa)    
Predicted Functional Partners:
ENSACIP00000001574
Uncharacterized protein.
    
  0.724
ENSACIP00000024340
Uncharacterized protein.
    
  0.724
ENSACIP00000022135
C1q domain-containing protein.
   
  0.630
ENSACIP00000016103
DUF4062 domain-containing protein.
    
 0.570
ENSACIP00000005112
MTOR associated protein, LST8 homolog (S. cerevisiae).
    
 0.549
ENSACIP00000015474
DET1 partner of COP1 E3 ubiquitin ligase.
    
  0.547
ENSACIP00000004126
Ribosomal protein S27a.
    
  0.516
ENSACIP00000019236
DNA ligase.
    
 0.501
ENSACIP00000009595
SET domain bifurcated histone lysine methyltransferase 1b.
    
  0.495
ENSACIP00000012012
Uncharacterized protein.
    
  0.495
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.