STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000012084SAM domain and HD domain 1. (598 aa)    
Predicted Functional Partners:
ENSACIP00000010168
LisH domain-containing protein.
    
 
 0.890
DCAF1
DDB1 and CUL4 associated factor 1.
    
 
 0.890
ENSACIP00000020837
Thymidine kinase 2.
   
 
 0.681
ENSACIP00000024245
Cyclin A2; Belongs to the cyclin family.
    
 
 0.567
ENSACIP00000030445
Cyclin A1; Belongs to the cyclin family.
    
 
 0.567
ENSACIP00000026665
Damage-specific DNA binding protein 1.
    
 
 0.489
ENSACIP00000013713
Deoxyguanosine kinase.
   
 
 0.471
ENSACIP00000003342
Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.
     
 0.465
ENSACIP00000029006
Ribonuclease H2, subunit C.
      
 0.457
ENSACIP00000004827
Deoxycytidine kinase.
   
 
 0.450
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.