STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000014085Opsin 1 (cone pigments), long-wave-sensitive, 1. (325 aa)    
Predicted Functional Partners:
ENSACIP00000006739
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2.
   
 0.809
ENSACIP00000010942
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1.
   
 0.809
ENSACIP00000010946
G protein gamma domain-containing protein.
   
 0.807
ENSACIP00000000384
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
   
 0.787
ENSACIP00000018989
Guanine nucleotide binding protein (G protein), beta 5a.
    
 0.760
GNB5
Guanine nucleotide binding protein (G protein), beta 5b.
    
 0.760
ENSACIP00000000503
Guanine nucleotide binding protein (G protein), beta polypeptide 2.
    
 0.742
ENSACIP00000011695
Guanine nucleotide binding protein (G protein), beta polypeptide 1b.
    
 0.742
ENSACIP00000016438
Guanine nucleotide binding protein (G protein), beta polypeptide 4b.
    
 0.742
ENSACIP00000019837
Guanine nucleotide binding protein (G protein), beta polypeptide 1a.
    
 0.742
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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