STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000014201GATA binding protein 1a. (425 aa)    
Predicted Functional Partners:
ENSACIP00000023632
LIM domain only 2 (rhombotin-like 1).
    
 0.971
ENSACIP00000019554
Zinc finger protein, FOG family member 1.
   
 0.928
ENSACIP00000016260
BHLH domain-containing protein.
   
 0.855
ENSACIP00000016936
T-cell acute lymphocytic leukemia 1.
   
 0.855
ENSACIP00000021621
NK2 homeobox 5.
   
 0.832
ENSACIP00000004087
Zinc finger protein, FOG family member 2a.
    
 0.825
SRF
Serum response factor b.
    
 0.769
ENSACIP00000012433
MADS-box domain-containing protein.
    
 0.769
ENSACIP00000022329
Nuclear factor of activated T cells 2a.
    
 0.764
ENSACIP00000012840
E1A binding protein p300 b.
    
 0.759
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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