STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000014327Uncharacterized protein. (477 aa)    
Predicted Functional Partners:
ENSACIP00000008451
Zinc finger and BTB domain containing 44.
    
 
 0.514
ENSACIP00000003603
DEAD (Asp-Glu-Ala-Asp) box polypeptide 52.
      
 0.491
ENSACIP00000007321
Solute carrier family 39 member 13.
      
 0.491
ENSACIP00000019099
Heparan sulfate proteoglycan 2.
    
 
 0.461
TIMP3
TIMP metallopeptidase inhibitor 3.
     
 0.458
ENSACIP00000012920
Zinc finger, SWIM-type containing 8.
      
 0.457
ENSACIP00000017732
Mitochondrial ribosomal protein S14.
      
 0.457
CLEC3B
C-type lectin domain family 3, member Bb.
     
 0.455
ENSACIP00000013941
C-type lectin domain family 3, member Ba.
     
 0.455
ENSACIP00000003396
BMS1 ribosome biogenesis factor.
      
 0.443
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.