STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FCGBPSi:dkey-65b12.6. (2802 aa)    
Predicted Functional Partners:
ENSACIP00000004650
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.890
ENSACIP00000003106
Fraser extracellular matrix complex subunit 1.
    
 0.751
ENSACIP00000006665
Fras1 related extracellular matrix 1b.
    
 0.742
ENSACIP00000018345
Fras1 related extracellular matrix 1a.
    
 0.742
ENSACIP00000011917
GLE1 RNA export mediator.
    
 0.685
ENSACIP00000012233
40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family.
   
  0.681
RANBP2
RAN binding protein 2.
   
 
  0.634
ENSACIP00000026490
Ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
   0.629
ENSACIP00000015875
Ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.
   
 
 0.615
ENSACIP00000006679
P53-induced death domain protein 1.
   
 0.610
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.