STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000025227GC-rich promoter binding protein 1-like 1. (501 aa)    
Predicted Functional Partners:
CNOT2
CCR4-NOT transcription complex subunit 2.
   
 
 0.525
ENSACIP00000026807
CCR4-NOT transcription complex, subunit 2.
   
 
 0.525
ENSACIP00000020713
CCR4-NOT transcription complex, subunit 1.
   
   0.473
ENSACIP00000020727
Uncharacterized protein.
   
   0.473
ENSACIP00000017546
Proteasome 26S subunit, ATPase 1b; Belongs to the AAA ATPase family.
      
 0.412
ENSACIP00000015152
Microtubule associated serine/threonine kinase 2.
      
 0.407
ENSACIP00000001383
Histone acetyltransferase type B catalytic subunit; Acetylates soluble but not nucleosomal histone H4 at 'Lys-5' (H4K5ac) and 'Lys-12' (H4K12ac) and, to a lesser extent, acetylates histone H2A at 'Lys-5' (H2AK5ac). Has intrinsic substrate specificity that modifies lysine in recognition sequence GXGKXG.
      
 0.400
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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