STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NFX1Nuclear transcription factor, X-box binding 1. (1061 aa)    
Predicted Functional Partners:
ENSACIP00000004650
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
   0.873
UBE3A
Ubiquitin protein ligase E3A.
     
 0.867
ENSACIP00000021764
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
    
 
 0.846
ENSACIP00000003699
Ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.
    
 
 0.811
ENSACIP00000009588
Ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
    
   0.811
ENSACIP00000026490
Ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
    
   0.811
ENSACIP00000031212
Ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.
    
   0.811
ENSACIP00000009936
RAD50 interactor 1.
   
    0.769
RPS20
Ribosomal protein S20.
    
   0.768
RPL7A
Ribosomal protein L7a.
    
 
 0.766
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.