STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000028772Pentatricopeptide repeat domain 3. (578 aa)    
Predicted Functional Partners:
ENSACIP00000005760
Mitochondrial ribosomal protein S27.
   
 0.999
ENSACIP00000009791
Mitochondrial ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family.
    
 0.999
ENSACIP00000010008
Mitochondrial ribosomal protein S28.
    
  0.999
ENSACIP00000010610
Mitochondrial ribosomal protein S10.
    
 0.999
ENSACIP00000010801
Death associated protein 3.
   
 0.999
ENSACIP00000021856
Mitochondrial ribosomal protein S23.
    
 0.999
ENSACIP00000023078
Mitochondrial ribosomal protein S15; Belongs to the universal ribosomal protein uS15 family.
   
 0.999
ENSACIP00000024208
Mitochondrial ribosomal protein S35.
    
 0.999
ENSACIP00000031166
Mitochondrial ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
   
 0.999
ENSACIP00000004272
Mitochondrial ribosomal protein S22.
   
 0.998
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.