STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000030481Bifunctional lysine-specific demethylase and histidyl-hydroxylase; Oxygenase that can act as both a histone lysine demethylase and a ribosomal histidine hydroxylase. (490 aa)    
Predicted Functional Partners:
ENSACIP00000026106
Ribosomal protein L8.
    
 
 0.896
ENSACIP00000007196
Mitochondrial ribosomal protein L2.
    
 
 0.663
ENSACIP00000016392
Ribosomal_L2_C domain-containing protein.
    
 
 0.663
RPL27A
Ribosomal protein L27a; Belongs to the universal ribosomal protein uL15 family.
    
 
 0.620
ENSACIP00000008782
tRNA-yW synthesizing protein 5.
      
 0.538
JMJD8
Jumonji domain containing 8.
      
 0.524
ENSACIP00000012438
Uncharacterized protein.
      
 0.450
ENSACIP00000003613
Hspb associated protein 1.
      
 0.446
ENSACIP00000022409
Mitochondrial ribosomal protein L15.
    
 
 0.427
ENSACIP00000007229
Lysine (K)-specific demethylase 8.
      
 0.418
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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