STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EWB00_009617Calpain; Belongs to the peptidase C2 family. (623 aa)    
Predicted Functional Partners:
EWB00_006715
Sorcin isoform 2.
   
0.748
EWB00_007511
Sorcin.
   
0.748
EWB00_007510
SJCHGC01795 protein.
   
0.748
EWB00_010175
Leucine-rich repeat serine/threonine-protein kinase 1.
    
 
 0.576
EWB00_003146
Talin-1.
    
 0.567
EWB00_002162
Endophilin-A2 isoform 1.
    
   0.566
EWB00_007046
Charged multivesicular body protein.
    
 
 0.477
EWB00_001759
Uncharacterized protein.
    
 
 0.475
EWB00_007438
Helicase SRCAP.
    
 
 0.473
EWB00_002394
Protein dpy-30.
    
 
 0.469
Your Current Organism:
Schistosoma japonicum
NCBI taxonomy Id: 6182
Other names: S. japonicum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.