STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EWB00_009187Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha. (391 aa)    
Predicted Functional Partners:
EWB00_009138
Geranylgeranyl transferase type-1 subunit beta.
    
 0.998
EWB00_010191
Protein farnesyltransferase subunit beta.
    
 0.994
EWB00_007685
Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.
    
 0.994
EWB00_006515
CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family.
     
 0.981
EWB00_010245
Alkyl transferase; Belongs to the UPP synthase family.
     
 0.975
EWB00_007740
Farnesyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family.
     
 0.975
EWB00_009074
Geranylgeranyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family.
     
 0.975
EWB00_004652
Dehydrodolichyl diphosphate synthase complex subunit nus1 isoform 1.
     
 0.969
EWB00_005033
CAAX prenyl protease 2.
     
 0.967
EWB00_003914
Decaprenyl-diphosphate synthase subunit 1; Belongs to the FPP/GGPP synthase family.
     
 0.965
Your Current Organism:
Schistosoma japonicum
NCBI taxonomy Id: 6182
Other names: S. japonicum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.