STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EWB00_008114E3 ubiquitin-protein ligase AMFR. (768 aa)    
Predicted Functional Partners:
EWB00_000206
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
 0.917
EWB00_001325
Protein sel-1.
   
 0.915
EWB00_009119
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
 0.914
EWB00_006117
Endoplasmic reticulum lectin 1.
   
 0.850
EWB00_010912
Protein OS-9.
   
 0.850
EWB00_000879
Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family.
    
 0.847
EWB00_009351
Transitional endoplasmic reticulum ATPase isoform 1; Belongs to the AAA ATPase family.
    
 0.847
KATNAL2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
    
 0.828
EWB00_000391
LRP2-binding protein isoform 2.
    
 0.817
EWB00_008583
Cytochrome c oxidase assembly factor 7.
    
 0.810
Your Current Organism:
Schistosoma japonicum
NCBI taxonomy Id: 6182
Other names: S. japonicum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.