STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EWB00_006261Upstream-binding protein. (806 aa)    
Predicted Functional Partners:
EWB00_006101
E3 ubiquitin-protein ligase RING2-A.
    
 
 0.589
EWB00_004956
PHD-type domain-containing protein.
    
  0.582
EWB00_005189
TATA-box-binding protein isoform 2.
    
 0.581
EWB00_006977
TATA-box-binding protein isoform 1.
    
 0.574
EWB00_001978
TATA box-binding protein-like protein isoform 1.
    
 0.574
Hint1
Histidine triad nucleotide binding protein 1.
   
  0.561
EWB00_009443
Nitrilase and fragile histidine triad fusion protein.
   
 0.543
EWB00_005372
Histidine triad nucleotide-binding protein isoform 1.
   
  0.518
EWB00_008758
Zinc finger protein.
    
 
 0.512
EWB00_002977
Multidrug resistance-associated protein.
     
 0.504
Your Current Organism:
Schistosoma japonicum
NCBI taxonomy Id: 6182
Other names: S. japonicum
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