Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EWB00_000211 | EWB00_002940 | Q86E05 | A0A4Z2DWE9 | Clone ZZZ363 mRNA sequence. | Calcium homeostasis endoplasmic reticulum protein. | 0.649 |
EWB00_000211 | EWB00_004400 | Q86E05 | A0A4Z2D690 | Clone ZZZ363 mRNA sequence. | Splicing factor 3B subunit 1 isoform 2. | 0.707 |
EWB00_000211 | EWB00_005089 | Q86E05 | A0A4Z2D2Z3 | Clone ZZZ363 mRNA sequence. | ATP-dependent RNA helicase DED1. | 0.771 |
EWB00_000211 | EWB00_008191 | Q86E05 | A0A4Z2CRN9 | Clone ZZZ363 mRNA sequence. | ATP-dependent RNA helicase DDX51 isoform 1; Belongs to the DEAD box helicase family. | 0.771 |
EWB00_000211 | EWB00_008984 | Q86E05 | A0A4Z2CND7 | Clone ZZZ363 mRNA sequence. | U5 small nuclear ribonucleoprotein component isoform 2. | 0.736 |
EWB00_000211 | tsu | Q86E05 | A4GU99 | Clone ZZZ363 mRNA sequence. | RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. | 0.999 |
EWB00_002940 | EWB00_000211 | A0A4Z2DWE9 | Q86E05 | Calcium homeostasis endoplasmic reticulum protein. | Clone ZZZ363 mRNA sequence. | 0.649 |
EWB00_002940 | EWB00_004400 | A0A4Z2DWE9 | A0A4Z2D690 | Calcium homeostasis endoplasmic reticulum protein. | Splicing factor 3B subunit 1 isoform 2. | 0.999 |
EWB00_002940 | EWB00_005089 | A0A4Z2DWE9 | A0A4Z2D2Z3 | Calcium homeostasis endoplasmic reticulum protein. | ATP-dependent RNA helicase DED1. | 0.779 |
EWB00_002940 | EWB00_006013 | A0A4Z2DWE9 | A0A4Z2DUE5 | Calcium homeostasis endoplasmic reticulum protein. | U6 snRNA-associated Sm-like protein. | 0.847 |
EWB00_002940 | EWB00_008191 | A0A4Z2DWE9 | A0A4Z2CRN9 | Calcium homeostasis endoplasmic reticulum protein. | ATP-dependent RNA helicase DDX51 isoform 1; Belongs to the DEAD box helicase family. | 0.781 |
EWB00_002940 | EWB00_008836 | A0A4Z2DWE9 | A0A4Z2CNM4 | Calcium homeostasis endoplasmic reticulum protein. | Pre-mRNA-processing factor 6. | 0.928 |
EWB00_002940 | EWB00_008984 | A0A4Z2DWE9 | A0A4Z2CND7 | Calcium homeostasis endoplasmic reticulum protein. | U5 small nuclear ribonucleoprotein component isoform 2. | 0.953 |
EWB00_002940 | tsu | A0A4Z2DWE9 | A4GU99 | Calcium homeostasis endoplasmic reticulum protein. | RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. | 0.520 |
EWB00_004400 | EWB00_000211 | A0A4Z2D690 | Q86E05 | Splicing factor 3B subunit 1 isoform 2. | Clone ZZZ363 mRNA sequence. | 0.707 |
EWB00_004400 | EWB00_002940 | A0A4Z2D690 | A0A4Z2DWE9 | Splicing factor 3B subunit 1 isoform 2. | Calcium homeostasis endoplasmic reticulum protein. | 0.999 |
EWB00_004400 | EWB00_005089 | A0A4Z2D690 | A0A4Z2D2Z3 | Splicing factor 3B subunit 1 isoform 2. | ATP-dependent RNA helicase DED1. | 0.802 |
EWB00_004400 | EWB00_006013 | A0A4Z2D690 | A0A4Z2DUE5 | Splicing factor 3B subunit 1 isoform 2. | U6 snRNA-associated Sm-like protein. | 0.909 |
EWB00_004400 | EWB00_008191 | A0A4Z2D690 | A0A4Z2CRN9 | Splicing factor 3B subunit 1 isoform 2. | ATP-dependent RNA helicase DDX51 isoform 1; Belongs to the DEAD box helicase family. | 0.826 |
EWB00_004400 | EWB00_008836 | A0A4Z2D690 | A0A4Z2CNM4 | Splicing factor 3B subunit 1 isoform 2. | Pre-mRNA-processing factor 6. | 0.994 |
page 1 of 4