STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EWB00_004470Serrate RNA effector molecule. (1206 aa)    
Predicted Functional Partners:
EWB00_004839
Nuclear cap-binding protein subunit 1 isoform 2.
   
 0.975
EWB00_005157
Nuclear cap-binding protein subunit 2.
    
 0.971
EWB00_001188
Phosphorylated adapter RNA export protein isoform 2.
   
 0.833
Hel25E
Spliceosome RNA helicase Ddx39b.
   
 0.793
EWB00_008513
Superkiller viralicidic activity 2-like 2 isoform 3.
   
 0.787
EWB00_006343
Superkiller viralicidic activity 2-like 2.
   
 0.787
EWB00_002181
Polymerase delta-interacting protein isoform 2.
   
 0.786
Tho4
THO complex subunit 4-A isoform 2.
   
 0.786
EWB00_003304
ATP-dependent RNA helicase A.
   
 0.708
EWB00_010108
Antiviral helicase SKI2.
   
 0.706
Your Current Organism:
Schistosoma japonicum
NCBI taxonomy Id: 6182
Other names: S. japonicum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.