STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EWB00_002647Usp domain-containing protein. (166 aa)    
Predicted Functional Partners:
EWB00_007801
RNA polymerase-associated protein.
    
 0.991
EWB00_011164
Tetratricopeptide repeat protein.
    
 0.817
EWB00_002801
Parafibromin.
    
 0.805
EWB00_004148
RNA polymerase-associated protein CTR9.
    
 0.739
Cyt-c-p
Cytochrome c proximal; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
    
 0.730
EWB00_010108
Antiviral helicase SKI2.
    
 0.721
EWB00_007326
Helicase SKI2W.
    
 0.721
EWB00_007325
Helicase SKI2W isoform 1.
    
 0.721
EWB00_010154
RNA polymerase II-associated factor 1.
    
 0.715
EWB00_004165
RNA polymerase II-associated factor 1 isoform 1.
    
 0.715
Your Current Organism:
Schistosoma japonicum
NCBI taxonomy Id: 6182
Other names: S. japonicum
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