STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EWB00_001784U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein. (184 aa)    
Predicted Functional Partners:
EWB00_002195
U4/U6.U5 tri-snRNP-associated protein.
   
 0.871
EWB00_005378
U4/U6.U5 tri-snRNP-associated protein isoform 3.
    
 0.831
EWB00_006013
U6 snRNA-associated Sm-like protein.
    
 0.819
LSM4
U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.
   
 0.812
LSM5
U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.
   
  0.807
EWB00_004304
U6 snRNA-associated Sm-like protein.
   
  0.806
LSM3
U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.
   
  0.804
EWB00_003237
RNA-binding protein isoform 2.
    
  0.803
EWB00_011108
U6 snRNA-associated Sm-like protein isoform 2.
   
  0.794
EWB00_011170
Small nuclear ribonucleoprotein Sm D3.
   
 0.791
Your Current Organism:
Schistosoma japonicum
NCBI taxonomy Id: 6182
Other names: S. japonicum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.