STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EWB00_001652Transmembrane protein. (183 aa)    
Predicted Functional Partners:
EWB00_003058
B9 domain-containing protein isoform 3.
   
 
 0.754
EWB00_010885
B9 domain-containing protein.
   
 
 0.745
EWB00_008646
Coiled-coil and C2 domain-containing protein.
    
 
 0.606
EWB00_007467
Meckel syndrome type 1 protein isoform 1.
    
 
 0.597
EWB00_002178
Meckelin.
   
  
 0.486
EWB00_008550
Protein lin-9 isoform 1.
   
  
 0.483
EWB00_004648
Nephrocystin-1.
   
  
 0.448
EWB00_006216
Uncharacterized protein.
      
 0.439
EWB00_002159
Nephrocystin-4 isoform 2.
      
 0.418
Your Current Organism:
Schistosoma japonicum
NCBI taxonomy Id: 6182
Other names: S. japonicum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.