STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EWB00_000613Ubiquitin carboxyl-terminal hydrolase 16; Belongs to the peptidase C19 family. (380 aa)    
Predicted Functional Partners:
EWB00_006776
Polyubiquitin.
    
 0.746
EWB00_002983
Polyubiquitin-B isoform 3.
    
 0.746
EWB00_000191
Putative small subunit ribosomal protein S27Ae.
    
 0.738
EWB00_009073
DNA excision repair protein.
    
 0.725
EWB00_006931
AN1-type zinc finger protein isoform 1.
    
 0.700
ubc
Polyubiquitin.
    
 0.693
EWB00_005173
Ubiquitin,domain-containing protein.
    
 0.693
EWB00_000009
Ubiquitin carboxyl-terminal hydrolase.
   
 
0.664
EWB00_004060
UV excision repair protein RAD23.
    
 0.656
EWB00_004059
UV excision repair protein RAD23A.
    
 0.656
Your Current Organism:
Schistosoma japonicum
NCBI taxonomy Id: 6182
Other names: S. japonicum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.